Window always goes to back.

I've got an issue on a work PC where a program I'm using always puts itself behind other open windows when I ask it to run a process. It's a workforce management program (eWFM if that helps) and if I ask it to retrieve some information or run a process it runs ok but as soon as I set it up and click the OK button it puts itself to the back of all the other windows which means I have to go back down to the task bar and click on it again to bring it to the front. Is this something to do with the program itself or is there something in windows I can adjust (if possible, I'm on a fairly locked down system) that will stop it doing this?